Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015861812.1_cds_XP_016515082.1_27463
CDS Infomation

[gene=LOC107831800] [db_xref=GeneID:107831800] [protein=histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5-like] [protein_id=XP_016515082.1] [location=20508..23588] [gbkey=CDS]
Sequence

ATGAAGAAGCGGCCATCAGAAAATGGTTATCACACCTTGGATTTTGGTGTTACTCCAAAA
CATAAAGTTCGGAAAGTCTGGGCTGTGCGGTATTTCCCCCCTGGTTGTGGTAGAAATGCT
CCAAAAGTTGACTTGCGCCACAAGGAAAATGCTGTGGTCTCCATAAGTGAAAATGTTGCT
GACGCGCTGGTGGCTCATGGTAGGAATGGTCCTAACACTGGGATTGAGTTCTGTTCTGTT
GAAGTTGTGAACTGTCTCCCTGACGTGGAAGAGAATGAAGAATTGGATAGGTTGGTCGGG
AATGCGTTAGCCAGAACCACGAGTCTGATAGAAAACAGGGTGGAAGAACCAACAAGTCAT
GCCAGATCTCTTGGATTTGAGTTGTCTAAAGATATTGAAAGTAGCGAAATGTCATCGCTC
AAGAAAGCAAAAGTCATTCAGCGTGATGAATTGGTGAAGGAAGTCGATGGGGAGAAAAGC
TCACTTTTGGTTGAAAATGTGGTCAGTGTGACTGATGGGGCAATTCCTGTTTGTTGTGTG
AAAGCATGCTCACCGCCTCAGTGGCCAGTCAAGAATGGAAATGTTGCGGATAATATTTCC
CCCTTGCCAAAGAATAAGTACTGCCAAAGAAGAGTCTTTGCTGTTCGTGACTTCCCTCCA
TTTTGTGGAAGAAACGCTCTGAAGCCAACCGAACAGGAGCGCTTGGGTGGTACTGAAGCA
AGCAGGAGAGTGGTTTTGTTGGATAAGGAATTTACAGAAAATGAAGCGGTTGAGACTTCA
AAAAATGTTATGGATACAAGGACATCGCACATGAAGTTGACTGTAAGTCGGGAAGCTGAT
TCTTTGAGTAAGATAGAGGTTGCTGGTTCCAAATGTAGCTTAATGGAACAAACAGTTTGT
ATTGAAGATCGAGAAGGTGTCCATGATAGTTATACTGGAAGGATCCAACTTGAAAAAACT
TTAATTTTGCCAGAGACAATGACGAAAAAGGAGAATGATGATGCAGGAAAAAATGTGGGG
AAGGTGAATATTGCATATTCACAGAATGAGTGTGAAAAGGTTACTACTGCAACACATGCT
CTTGGTTCTGGAGATGAAATTATTAGGCCAATTGTGCATGGCTCGATGGCTGAACCCTAT
TGTCCATGGAAGCAAACTCATCTACATGGGCCGGGGAGCAGAAATGTGATTGTGTGTGGT
CTGATGGCAGAGCCATACTGTTCCTGGAAGCAGATGAAGCAAACTAGTTTAGATGGTGTG
ACGAGTAGAAACCAAGTTCAAAAGCCTAACATGCATCGGCAGAAGAAATCCTTAGCTGTT
GCCAGAAAAAGTATTCCAAAACCAAAATTTTCACCGAGACAGTTTGGCAGGACTAAATCA
GGTTTCATTGGTGAAGTTGCGGAAGGATATTCAAATGCACTGGTTGCCAGCAACGATAGA
GCTTGTGTTTTGAATAGGAAGGCACTACCTGAAGAATCTCCAATTGGACAGGGGCACTGT
GAATTTGATGTGAATCTGCCACCTTTTGGTTCCAGCAGCAATGATGCTCGTAGTAAAGTC
AGAGAGACTCTTCGTCTGTTTCAGTCTATTTGTAGAAAAATCTTGCGAGGGGAAGAATCA
AATGGAGAAGTAAAACCTAAGCAGAAAGATAAAAAGAACAGAAGGATTGATATTCAAGCA
TCGAATTTTATCAAAGAAAAAGGGAAGGAAGTTAATACAGGACCCCGGATACTGGGAGAA
GTTCCAGGAGTTGAAGTAGGAGATGCGTTCCAATACAGGGTTGAACTTGCTCTTGTGGGA
GTTCATCGCTTATATCAAGCCGGTATTGATTTCCTGAACAATGGAGGAATGCTGGTTGCA
ACTAGCATTGTTGCTTCAGGGGGCTATGACGATGATTTGGGAGATGCTGATGAGCTGATT
TATTCTGGGCAAGGTGGAAATTTGACTGGCAAGGACAAAATCCGTGAAGACCAGAAACTT
GTGAAAGGTAATTTAGCCTTGAAGAATAGTATAGCTACAAGGAATCCTGTTCGGGTGATT
CGTGGATCTAAGGCTGAATCCACAGATGGAAGAGCTAATTTGGTGACAACTTATGTGTAC
GATGGCTTGTACACTGTTCAAAATTATTGGACAGAACGAGGGCCACATGGTAAGATGGTC
TTTATGTTTAAGTTGGTGAGAATTCCCGGACAACCAGAGCTTACTTGGAGAGAAGTAAAG
TCATCAAGAAAGTCCAAAGTGCGTCATGGTGTTTGTGTTCCTGATATTACAGAAGGAAAG
GAGTCACTGCCAGTAACTGCTGTGAACACAATTGATGGTGAGAAACCCCCACCATTCAAG
TACATCAAGAGGATGATGTATCCGGATGGTTTCCACCTTGCTCCACCTAAAGGCTGTGAT
TGTATTGGTAGATGTTCTGATGCAAAGAGGTGCTCATGTGCAGTTAAAAATGGAGGTGAG
ATCCCATACAACCGCAATGGGGCTATTGTTGAAGTTAAGCCTCTTGTGTATGAGTGTGGT
CCTTTTTGTAAGTGCCCTCCTTCATGCTATAATAGAGTGAGCCAACGTGGTATTAAAATT
CCGCTGGAGATCTTCAAGACAGATACAAGGGGCTGGGGTGTGAGAGCTGTAACTTCTATC
TCTTCAGGAACCTTTATCTGTGAGTATGCAGGAGAAATTCTTGAGGACAGAGAAGCCGAA
CAAAGAATTGGTAGTGATGAATATCTTTTTGATATTGGAAAGAACTATAGTGATTGTACT
GATAACTCTTCTGGACAAGCAGACCTAAATGAGTTAGCAGATGAGGGTGGTTATACAATT
GATGCAGCGCACTATGGAAATGTTGGACGATTTATCAATCACAGTTGTTCACCCAACTTG
TATGCGCAGAATGTTGTTTATGATCATGAGGATAAGAAAATGCCCCATATCATGCTATTT
GCGGCAGATAATATACCTCCCTTGAAGGAGCTTTCTTATCATTACAACTATTCTGTGGAT
CAGGTTTATGACTCTGATGGCAAGATCAAGGTGAAGAGGTGCTTTTGTGGATCTTCAGAC
TGTACTGGTAGGATGTACTAG

Peptide Sequence

PEP ID

XP_016515082.1
PEP Infomation

PREDICTED: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5-like [Nicotiana tabacum]
Sequence

MKKRPSENGYHTLDFGVTPKHKVRKVWAVRYFPPGCGRNAPKVDLRHKENAVVSISENVA
DALVAHGRNGPNTGIEFCSVEVVNCLPDVEENEELDRLVGNALARTTSLIENRVEEPTSH
ARSLGFELSKDIESSEMSSLKKAKVIQRDELVKEVDGEKSSLLVENVVSVTDGAIPVCCV
KACSPPQWPVKNGNVADNISPLPKNKYCQRRVFAVRDFPPFCGRNALKPTEQERLGGTEA
SRRVVLLDKEFTENEAVETSKNVMDTRTSHMKLTVSREADSLSKIEVAGSKCSLMEQTVC
IEDREGVHDSYTGRIQLEKTLILPETMTKKENDDAGKNVGKVNIAYSQNECEKVTTATHA
LGSGDEIIRPIVHGSMAEPYCPWKQTHLHGPGSRNVIVCGLMAEPYCSWKQMKQTSLDGV
TSRNQVQKPNMHRQKKSLAVARKSIPKPKFSPRQFGRTKSGFIGEVAEGYSNALVASNDR
ACVLNRKALPEESPIGQGHCEFDVNLPPFGSSSNDARSKVRETLRLFQSICRKILRGEES
NGEVKPKQKDKKNRRIDIQASNFIKEKGKEVNTGPRILGEVPGVEVGDAFQYRVELALVG
VHRLYQAGIDFLNNGGMLVATSIVASGGYDDDLGDADELIYSGQGGNLTGKDKIREDQKL
VKGNLALKNSIATRNPVRVIRGSKAESTDGRANLVTTYVYDGLYTVQNYWTERGPHGKMV
FMFKLVRIPGQPELTWREVKSSRKSKVRHGVCVPDITEGKESLPVTAVNTIDGEKPPPFK
YIKRMMYPDGFHLAPPKGCDCIGRCSDAKRCSCAVKNGGEIPYNRNGAIVEVKPLVYECG
PFCKCPPSCYNRVSQRGIKIPLEIFKTDTRGWGVRAVTSISSGTFICEYAGEILEDREAE
QRIGSDEYLFDIGKNYSDCTDNSSGQADLNELADEGGYTIDAAHYGNVGRFINHSCSPNL
YAQNVVYDHEDKKMPHIMLFAADNIPPLKELSYHYNYSVDQVYDSDGKIKVKRCFCGSSD
CTGRMY

Transcript Sequence

Gene sequence data has not been registered.